Single Cell Analysis of Uveal Melanomas Reveals LAG3 as a Promising Therapeutic Target
Andrew Pack
Introduction. Uveal Melanomas are a cancer of the melanocytes in the uveal tract of the eye, which is made up of the iris, choroid and ciliary body.1 Virtually all uveal melanomas’s mechanism of pathogenesis is a mutation that activates a gene, GNAQ, which is involved in the GPCR pathway.2 Uveal melanomas are relatively rare, with an incidence of 1-9 cases per million people per year.1 The prognosis of uveal melanomas is relatively poor, with a 5 year 30% mortality and a 15 year 45% mortality.1 This type of cancer is more common among people aged 50-70, those with fair skin, and those with a family history.1 Uveal melanomas can be diagnosed by an ophthalmologist with a slit lamp.1 Uveal melanomas most commonly metastasize to the liver, lungs and lymph nodes.1,3 Currently uveal melanomas are treated with a variety of treatments including brachytherapy, enucleation, and checkpoint therapy.2 Single Cell Sequencing was done to interrogate the highly heterogeneous tumor microenvironment, and to investigate why they had limited responsiveness to checkpoint therapy that worked better for cutaneous melanomas.4 Methodology. Single Cell Sequencing was conducted on cells from 8 primary and 3 metastatic samples.4 The metastatic aggressiveness of these tumors varied, where Class 1 tumors are generally characterized by low metastatic risk, and class 2 are generally characterized by higher metastatic risk.5 Results. A t-SNE plot was made from 1865 expressed RNA genes of 59,915 cells.4 Marker genes that were known for specific cell types allowed them to label these cells, i.e. NK cells, T cells, etc.4 Quantification of cells by type in each tumor sample was conducted.4 Ridge plots of the CD8+ T cell were created using Seurat, a R package, which showed that LAG3 was highly expressed, and PD-L1 and CTLA-4 were lower expresed.4 Immunohistochemistry confirmed that RNA expression levels of LAG3 correlated with expression of LAG3 protein.4 Conclusion. This provided more data on the heterogeneous environment of uveal melanomas, and provided rationale for a potential therapeutic target for checkpoint therapy: LAG3.4’6 What makes LAG3 checkpoint therapy particularly promising is in other cancer models like chronic lymphocytic leukemia, LAG3 has been tested in dual LAG3/PD1 immune checkpoint therapy with good efficacy.7 In addition in a mice model, LAG3 immunotherapy has been able to cause regression of recurrent melanoma.8
- Jager MJ, Shields CL, Cebulla CM, Abdel-Rahman MH, Grossniklaus HE, Stern MH, Carvajal RD, Belfort RN, Jia R, Shields JA, Damato BE. Uveal melanoma. Nat Rev Dis Primers. 2020 Apr 9;6(1):24. doi: 10.1038/s41572-020-0158-0. PMID: 32273508.
- Smit KN, Jager MJ, de Klein A, Kiliҫ E. Uveal melanoma: Towards a molecular understanding. Progress in Retinal and Eye Research. 2020;75:100800. doi:10.1016/j.preteyeres.2019.100800.
- Johansson, P.A., Brooks, K., Newell, F. et al. Whole genome landscapes of uveal melanoma show an ultraviolet radiation signature in iris tumours. Nat Commun 11, 2408 (2020). https://doi.org/10.1038/s41467-020-16276-8.
- Durante, M.A., Rodriguez, D.A., Kurtenbach, S. et al. Single-cell analysis reveals new evolutionary complexity in uveal melanoma. Nat Commun 11, 496 (2020). https://doi.org/10.1038/s41467-019-14256-1.
- Field MG, Durante MA, Anbunathan H, Cai LZ, Decatur CL, Bowcock AM, Kurtenbach S, Harbour JW. Punctuated evolution of canonical genomic aberrations in uveal melanoma. Nat Commun. 2018 Jan 9;9(1):116. doi: 10.1038/s41467-017-02428-w. PMID: 29317634; PMCID: PMC5760704.
- Karlsson, J., Nilsson, L.M., Mitra, S. et al. Molecular profiling of driver events in metastatic uveal melanoma. Nat Commun 11, 1894 (2020). https://doi.org/10.1038/s41467-020-15606-0.
- Wierz M, Pierson S, Guyonnet L, Viry E, Lequeux A, Oudin A, Niclou SP, Ollert M, Berchem G, Janji B, Guérin C, Paggetti J, Moussay E. Dual PD1/LAG3 immune checkpoint blockade limits tumor development in a murine model of chronic lymphocytic leukemia. Blood. 2018 Apr 5;131(14):1617-1621. doi: 10.1182/blood-2017-06-792267. Epub 2018 Feb 13. PMID: 29439955; PMCID: PMC5887766.
- Andrews LP, Marciscano AE, Drake CG, Vignali DA. LAG3 (CD223) as a cancer immunotherapy target. Immunol Rev. 2017;276(1):80-96. doi:10.1111/imr.12519.